PET

The tutorials use data that can be downloaded here.

GATE Data

The following 4 tutorials demonstrate the full capabilities of PET reconstruction in PyTomography with GATE data of a simulated brain phantom. The tutorials cover sinogram/listmode and nonTOF/TOF reconstruction with scatter (nonTOF/TOF) and random correction.

GATE Sinogram

PETGATE Scatter Sinogram tutorial

GATE TOF Sinogram

PETGATE Scatter Sinogram TOF tutorial

GATE Listmode

PETGATE Scatter LM tutorial

GATE TOF Listmode

PETGATE Scatter LM TOF tutorial

Clinical Data from Discovery MI

This tutorial demonstrates how to reconstruct data exported from the GE software Duetto (listmode enabled).

Discovery MI

GE HDF5 tutorial

Uncertainty Estimation

GE HDF5 tutorial

AI-Based reconstruction

This tutorial demonstrates how to use the Deep Image Prior (DIP) reconstruction algorithm for reconstruction of brain phantom used in the GATE tutorials, and includes the development of a PyTorch neural network.

GATE Deep Image Prior

PETGATE DIP tutorial